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47 check-ins that include changes to files matching 'example/*'
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2024-09-22
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| 12:17 | Bump to v1.2.0. Update for C++17 and boost 1.86.0 check-in: 1a41e97844 user: gav tags: trunk | |
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2020-01-15
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| 21:39 | Merged from master branch check-in: 44ee815dfc user: gavin.band@well.ox.ac.uk tags: trunk | |
| 21:08 | Added example/example.8bits.bgen.bgi check-in: 4adbf39684 user: gavin.band@well.ox.ac.uk tags: trunk, master | |
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2018-03-05
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| 17:03 | merge doc changes check-in: b166d18d04 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 15:47 | Move example/compute_dosages.cpp -> example/compute_expected_dosage.cpp check-in: 1c6f47bc09 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 15:14 | Merged check-in: 19d91c1d6d user: gavin.band@well.ox.ac.uk tags: trunk | |
| 14:32 | Merged changes from rescomp check-in: f8fc792d68 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 14:26 | example/compute_dosages.cpp: compute expected dosage only check-in: a588c2fb78 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2018-01-31
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| 22:13 | compute_dosages.cpp: call sync_with_stdio(false) check-in: b189ccbd1f user: gavin.band@well.ox.ac.uk tags: trunk | |
| 22:11 | Fix some names and comments in compute_dosages.cpp check-in: 1bb6df99bc user: gavin.band@well.ox.ac.uk tags: trunk | |
| 22:10 | Added example program: compute_dosages.cpp check-in: aff165a320 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2018-01-12
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| 11:26 | count_alleles.cpp: comment fix check-in: f583f93c2a user: gavin.band@well.ox.ac.uk tags: trunk | |
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2018-01-08
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| 13:10 | Merged from default branch Leaf check-in: 235c860cc3 user: gavin.band@well.ox.ac.uk tags: trunk, origin/query_experiment | |
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2017-07-13
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| 09:37 | Merged into master from release branch check-in: 5baeae292b user: gavin.band@well.ox.ac.uk tags: trunk | |
| 09:11 | Started experiment with rejigged Query object check-in: a961170912 user: gavin.band@well.ox.ac.uk tags: trunk, origin/query_experiment | |
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2017-06-20
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| 08:56 | Do not install example programs or tests check-in: c9db87cabc user: gavin.band@well.ox.ac.uk tags: trunk | |
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2017-06-11
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| 21:23 | Merged check-in: c23c024693 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2017-05-16
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| 12:00 | example: regenerate index files using up-to-date bgenix check-in: 3e0f8370b9 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2017-04-18
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| 09:17 | Added index file for example/haplotypes.bgen check-in: 6aa76813c2 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 08:30 | Added example files containing haplotypes check-in: 2c6cf1ea3e user: gavin.band@well.ox.ac.uk tags: trunk | |
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2017-03-31
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| 22:32 | Fix build of count_alleles for dl rt pthread check-in: 8d1df58592 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 22:18 | count_alleles.cpp: Fix usage statement check-in: 5ca9369a21 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 22:16 | count_alleles.cpp: Move output code to separate function. Comment fixes. check-in: bcb47c33b1 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 22:04 | count_alleles: simplify getting ids check-in: 5ba2d13237 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 22:01 | IndexQuery: move query methods to base class check-in: b8a3c0524d user: gavin.band@well.ox.ac.uk tags: trunk | |
| 21:59 | count_alleles.cpp: use a using statement to simplify code check-in: 3b87d8674e user: gavin.band@well.ox.ac.uk tags: trunk | |
| 21:57 | Added a new example program example/count_alleles.cpp, updated some methods to match check-in: 60780fe286 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2017-03-22
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| 10:09 | example/complex.bgen: rebuild index check-in: 614f6a063b user: gavin.band@well.ox.ac.uk tags: trunk | |
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2017-01-24
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| 08:48 | bgenix: implement -v11 flag which transcodes to BGEN v1.1. Remove sample identifiers from example BGEN v1.1 file. check-in: 149626d6da user: gavin.band@well.ox.ac.uk tags: trunk | |
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2017-01-17
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| 12:06 | Update code for to v1.3 spec nomenclature, Layout0, Layout1, Layout2 etc. check-in: 15d67c9d5d user: gavin.band@well.ox.ac.uk tags: trunk | |
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2016-12-01
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| 22:59 | Merged from default branch check-in: add61c3857 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2016-11-12
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| 21:26 | Add support for zstandard check-in: 37be7a56aa user: gavin.band@well.ox.ac.uk tags: trunk | |
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2016-05-26
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| 17:27 | Fix complex.bgen, complex.bgen.bgi to actually hold data check-in: 5682496d0a user: gavin.band@well.ox.ac.uk tags: trunk | |
| 17:18 | bgenix: add -excl-rsids and -excl-range options check-in: 114435ddf0 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2016-04-09
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| 22:48 | Added complex example files to example/ directory check-in: 14c40e31f3 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2015-12-14
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| 10:23 | Added a example/example.sample file, which lists sample IDs check-in: c42ceb972a user: gavin.band@well.ox.ac.uk tags: trunk | |
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2015-11-06
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| 23:42 | Add bgen-cat. Split wscript into subdirs. Move bgen_to_vcf to example/ subdir check-in: b23dd2841b user: gavin.band@well.ox.ac.uk tags: trunk | |
| 21:51 | Rename example files to remove leading zeroes from bits check-in: 43dde3ce45 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 17:19 | Merged from default check-in: 7fd999e1f3 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 15:42 | bgen_to_vcf: report whether samples are named or not. check-in: f6377a6820 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 15:17 | Add example files with every possible number of bits. check-in: 58362e2942 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 14:05 | Rename operator() as set_value(). Include entry index in set_value(). check-in: 2834af1a8c user: gavin.band@well.ox.ac.uk tags: trunk | |
| 10:36 | Merged from dev (default) branch check-in: 8fda7137d7 user: gavin.band@well.ox.ac.uk tags: trunk | |
| 10:33 | example.gen: add some missing data. Generate bgen files at different bit sizes. check-in: c5a72b9a29 user: gavin.band@well.ox.ac.uk tags: trunk | |
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2015-11-05
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| 21:25 | bgen_to_vcf.cpp: print alleles correctly. Use genfile::byte_t instead of char buffers check-in: fedc53f58b user: gavin.band@well.ox.ac.uk tags: trunk | |
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2015-11-04
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| 23:18 | bgen: add support for optional set_min_max_ploidy() and finalise() methods of setter objects check-in: 34366f4d1c user: gavin.band@well.ox.ac.uk tags: trunk | |
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2015-09-17
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| 09:32 | First import of files to repo. See qctool repo for original source. check-in: 730a6e4490 user: gavin.band@well.ox.ac.uk tags: trunk | |